The Unseen Hand: Deconstructing System Prompts, User Prompts, and Assistant Prefilling in AI
Last Updated on September 4, 2025 by Editorial Team
Author(s): Abduldattijo
Originally published on Towards AI.
The Unseen Hand: Deconstructing System Prompts, User Prompts, and Assistant Prefilling in AI
Ever wonder what really happens when you ask an AI a question? It feels like a simple back-and-forth, but beneath the surface, there’s a surprisingly intricate architecture at play. It’s not just your question — the “user prompt” — that’s shaping the answer. There are other, often invisible, forces at work. Did you know that before you even type your query, a set of foundational rules, known as a “system prompt,” has likely already been given to the AI? Or that some developers use a clever trick called “assistant prefilling” to nudge the AI’s response in a specific direction before it even starts generating?
This article explores the complexities of how AI prompts function, detailing the differences between system prompts, user prompts, and assistant prefilling. It highlights how these elements interact to shape AI behavior and responses, emphasizes the importance of a well-structured prompting approach for reliable AI applications, and discusses the architectural choices in AI design that dictate output control and predictability.
Read the full blog for free on Medium.
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